[ovirt-users] memory leak in 3.5.6 - not vdsm
Charles Kozler
charles at fixflyer.com
Mon Feb 1 16:40:30 UTC 2016
Sandro / Nir -
I followed your steps plus
http://www.ovirt.org/OVirt_3.6_Release_Notes#Fedora_.2F_CentOS_.2F_RHEL
Engine upgraded fine but then when I got to upgrading a node I did:
$ yum install http://resources.ovirt.org/pub/yum-repo/ovirt-release36.rpm
$ yum update -y
And then rebooted the node. I noticed libvirt was updated by a .1 release
number but vdsm (where the memory leak issue I thought was?) was not
upgraded. In fact, very little of ovirt packages on the node were
noticeably not updated
Updated node received the following updated packages during the install:
http://pastebin.ca/3362714
Note specifically the only packages updated via the ovirt3.6 repository
was ioprocess, otopi, ovirt-engine-sdk-python, ovirt-host-deploy,
ovirt-release36, and python-ioprocess. I had expected to see some packages
like vdsm and the likes updated - or was this not the case?
Upgraded node:
[compute[root at node02 yum.repos.d]$ rpm -qa | grep -i vdsm
vdsm-4.16.30-0.el6.x86_64
vdsm-python-zombiereaper-4.16.30-0.el6.noarch
vdsm-cli-4.16.30-0.el6.noarch
vdsm-yajsonrpc-4.16.30-0.el6.noarch
vdsm-jsonrpc-4.16.30-0.el6.noarch
vdsm-xmlrpc-4.16.30-0.el6.noarch
vdsm-python-4.16.30-0.el6.noarch
Nonupgraded node
[compute[root at node01 ~]$ rpm -qa | grep -i vdsm
vdsm-cli-4.16.30-0.el6.noarch
vdsm-jsonrpc-4.16.30-0.el6.noarch
vdsm-python-zombiereaper-4.16.30-0.el6.noarch
vdsm-xmlrpc-4.16.30-0.el6.noarch
vdsm-yajsonrpc-4.16.30-0.el6.noarch
vdsm-4.16.30-0.el6.x86_64
vdsm-python-4.16.30-0.el6.noarch
Also, the docs stated that the engine VM would migrate to the freshly
upgraded node since it would have a higher number but it did not
So I cant really confirm whether or not my issue will be resolved? Or that
if the node was actually updated properly?
Please advise on how to confirm
Thank you!
On Sat, Jan 23, 2016 at 12:55 AM, Charles Kozler <charles at fixflyer.com>
wrote:
> Thanks Sandro. Should clarify my storage is external on a redundant SAN.
> The steps I was concerned about was the actual upgrade. I tried to upgrade
> before and it brought my entire stack crumbling down so I'm hesitant. This
> bug seems like a huge bug that should at least somehow backported if at all
> possible because, to me, it renders the entire 3.5.6 branch unusable as no
> VMs can be deployed since OOM will eventually kill them. In any case that's
> just my opinion and I'm a new user to ovirt. The docs I followed originally
> got me going how I need and somehow didn't work for 3.6 in the same fashion
> so naturally I'm hesitant to upgrade but clearly have no option if I want
> to continue my infrastructure on ovirt. Thank you again for taking the time
> out to assist me, I truly appreciate it. I will try an upgrade next week
> and pray it all goes well :-)
> On Jan 23, 2016 12:40 AM, "Sandro Bonazzola" <sbonazzo at redhat.com> wrote:
>
>>
>>
>> On Fri, Jan 22, 2016 at 10:53 PM, Charles Kozler <charles at fixflyer.com>
>> wrote:
>>
>>> Sandro -
>>>
>>> Do you have available documentation that can support upgrading self
>>> hosted? I followed this
>>> http://community.redhat.com/blog/2014/10/up-and-running-with-ovirt-3-5/
>>>
>>> Would it be as easy as installing the RPM and then running yum upgrade?
>>>
>>>
>> Note that mentioned article describes an unsupported hyperconverged setup
>> running NFS over Gluster.
>> That said,
>> 1) put the hosted-engine storage domain into global maintenance mode
>> 2) upgrade the engine VM
>> 3) select the first host to upgrade and put it under maintenance from the
>> engine, wait for the engine vm to migrate if needed.
>> 4) yum upgrade the first host and wait until ovirt-ha-agent completes
>> 5) exit global and local maintenance mode
>> 6) repeat 3-5 on all the other hosts
>> 7) once all hosts are updated you can increase the cluster compatibility
>> level to 3.6. At this point the engine will trigger the auto-import of the
>> hosted-engine storage domain.
>>
>> Simone, Roy, can you confirm above steps? Maybe also you can update
>> http://www.ovirt.org/Hosted_Engine_Howto#Upgrade_Hosted_Engine
>>
>>
>>
>>> Thanks
>>>
>>> On Fri, Jan 22, 2016 at 4:42 PM, Sandro Bonazzola <sbonazzo at redhat.com>
>>> wrote:
>>>
>>>>
>>>> Il 22/Gen/2016 22:31, "Charles Kozler" <charles at fixflyer.com> ha
>>>> scritto:
>>>> >
>>>> > Hi Nir -
>>>> >
>>>> > do you have a release target date for 3.5.8? Any estimate would help.
>>>> >
>>>>
>>>> There won't be any supported release after 3.5.6. Please update to
>>>> 3.6.2 next week
>>>>
>>>> > If its not VDSM, what is it exactly? Sorry, I understood from the
>>>> ticket it was something inside vdsm, was I mistaken?
>>>> >
>>>> > CentOS 6 is the servers. 6.7 to be exact
>>>> >
>>>> > I have done all forms of flushing that I can (page cache, inodes,
>>>> dentry's, etc) and as well moved VM's around to other nodes and nothing
>>>> changes the memory. How can I find the leak? Where is the leak? RES shows
>>>> the following of which, the totals dont add up to 20GB
>>>> >
>>>> > PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND
>>>>
>>>>
>>>> > 19044 qemu 20 0 8876m 4.0g 5680 S 3.6 12.9 1571:44
>>>> qemu-kvm
>>>>
>>>> > 26143 qemu 20 0 5094m 1.1g 5624 S 9.2 3.7 6012:12
>>>> qemu-kvm
>>>>
>>>> > 5837 root 0 -20 964m 624m 3664 S 0.0 2.0 85:22.09
>>>> glusterfs
>>>>
>>>> > 14328 root 0 -20 635m 169m 3384 S 0.0 0.5 43:15.23
>>>> glusterfs
>>>>
>>>> > 5134 vdsm 0 -20 4368m 111m 10m S 5.9 0.3 3710:50 vdsm
>>>>
>>>>
>>>> > 4095 root 15 -5 727m 43m 10m S 0.0 0.1 0:02.00
>>>> supervdsmServer
>>>> >
>>>> > 4.0G + 1.1G + 624M + 169 + 111M + 43M = ~7GB
>>>> >
>>>> > This was top sorted by RES from highest to lowest
>>>> >
>>>> > At that point I wouldnt know where else to look except slab / kernel
>>>> structures. Of which slab shows:
>>>> >
>>>> > [compute[root at node1 ~]$ cat /proc/meminfo | grep -i slab
>>>> > Slab: 2549748 kB
>>>> >
>>>> > So roughly 2-3GB. Adding that to the other use of 7GB we have still
>>>> about 10GB unaccounted for
>>>> >
>>>> > On Fri, Jan 22, 2016 at 4:24 PM, Nir Soffer <nsoffer at redhat.com>
>>>> wrote:
>>>> >>
>>>> >> On Fri, Jan 22, 2016 at 11:08 PM, Charles Kozler <
>>>> charles at fixflyer.com> wrote:
>>>> >> > Hi Nir -
>>>> >> >
>>>> >> > Thanks for getting back to me. Will the patch to 3.6 be backported
>>>> to 3.5?
>>>> >>
>>>> >> We plan to include them in 3.5.8.
>>>> >>
>>>> >> > As you can tell from the images, it takes days and days for it to
>>>> increase
>>>> >> > over time. I also wasnt sure if that was the right bug because
>>>> VDSM memory
>>>> >> > shows normal from top ...
>>>> >> >
>>>> >> > PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+
>>>> COMMAND
>>>> >> > 5134 vdsm 0 -20 4368m 111m 10m S 2.0 0.3 3709:28 vdsm
>>>> >>
>>>> >> As you wrote, this issue is not related to vdsm.
>>>> >>
>>>> >> >
>>>> >> > Res is only 111M. This is from node1 which is showing currently
>>>> 20GB of 32GB
>>>> >> > used with only 2 VMs running on it - 1 with 4G and another with ~1
>>>> GB of RAM
>>>> >> > configured
>>>> >> >
>>>> >> > The images are from nagios and the value here is a direct
>>>> correlation to
>>>> >> > what you would see in the free command output. See below from an
>>>> example of
>>>> >> > node 1 and node 2
>>>> >> >
>>>> >> > [compute[root at node1 ~]$ free
>>>> >> > total used free shared buffers
>>>> cached
>>>> >> > Mem: 32765316 20318156 12447160 252 30884
>>>> 628948
>>>> >> > -/+ buffers/cache: 19658324 13106992
>>>> >> > Swap: 19247100 0 19247100
>>>> >> > [compute[root at node1 ~]$ free -m
>>>> >> > total used free shared buffers
>>>> cached
>>>> >> > Mem: 31997 19843 12153 0 30
>>>> 614
>>>> >> > -/+ buffers/cache: 19199 12798
>>>> >> > Swap: 18795 0 18795
>>>> >> >
>>>> >> > And its correlated image http://i.imgur.com/PZLEgyx.png (~19GB
>>>> used)
>>>> >> >
>>>> >> > And as a control, node 2 that I just restarted today
>>>> >> >
>>>> >> > [compute[root at node2 ~]$ free
>>>> >> > total used free shared buffers
>>>> cached
>>>> >> > Mem: 32765316 1815324 30949992 212 35784
>>>> 717320
>>>> >> > -/+ buffers/cache: 1062220 31703096
>>>> >> > Swap: 19247100 0 19247100
>>>> >>
>>>> >> Is this rhel/centos 6?
>>>> >>
>>>> >> > [compute[root at node2 ~]$ free -m
>>>> >> > total used free shared buffers
>>>> cached
>>>> >> > Mem: 31997 1772 30225 0 34
>>>> 700
>>>> >> > -/+ buffers/cache: 1036 30960
>>>> >> > Swap: 18795 0 18795
>>>> >> >
>>>> >> > And its correlated image http://i.imgur.com/8ldPVqY.png (~2GB
>>>> used). Note
>>>> >> > how 1772 in the image is exactly what is registered under 'used'
>>>> in free
>>>> >> > command
>>>> >>
>>>> >> I guess you should start looking at the processes running on these
>>>> nodes.
>>>> >>
>>>> >> Maybe try to collect memory usage per process using ps?
>>>> >>
>>>> >> >
>>>> >> > On Fri, Jan 22, 2016 at 3:59 PM, Nir Soffer <nsoffer at redhat.com>
>>>> wrote:
>>>> >> >>
>>>> >> >> On Fri, Jan 22, 2016 at 9:25 PM, Charles Kozler <
>>>> charles at fixflyer.com>
>>>> >> >> wrote:
>>>> >> >> > Here is a screenshot of my three nodes and their increased
>>>> memory usage
>>>> >> >> > over
>>>> >> >> > 30 days. Note that node #2 had 1 single VM that had 4GB of RAM
>>>> assigned
>>>> >> >> > to
>>>> >> >> > it. I had since shut it down and saw no memory reclamation
>>>> occur.
>>>> >> >> > Further, I
>>>> >> >> > flushed page caches and inodes and ran 'sync'. I tried
>>>> everything but
>>>> >> >> > nothing brought the memory usage down. vdsm was low too (couple
>>>> hundred
>>>> >> >> > MB)
>>>> >> >>
>>>> >> >> Note that there is an old leak in vdsm, will be fixed in next 3.6
>>>> build:
>>>> >> >> https://bugzilla.redhat.com/1269424
>>>> >> >>
>>>> >> >> > and there was no qemu-kvm process running so I'm at a loss
>>>> >> >> >
>>>> >> >> > http://imgur.com/a/aFPcK
>>>> >> >> >
>>>> >> >> > Please advise on what I can do to debug this. Note I have
>>>> restarted node
>>>> >> >> > 2
>>>> >> >> > (which is why you see the drop) to see if it raises in memory
>>>> use over
>>>> >> >> > tim
>>>> >> >> > even with no VM's running
>>>> >> >>
>>>> >> >> Not sure what is "memory" that you show in the graphs.
>>>> Theoretically this
>>>> >> >> may be
>>>> >> >> normal memory usage, Linux using free memory for the buffer cache.
>>>> >> >>
>>>> >> >> Can you instead show the output of "free", during one day, maybe
>>>> run once
>>>> >> >> per hour?
>>>> >> >>
>>>> >> >> You may also like to install sysstat for collecting and monitoring
>>>> >> >> resources usage.
>>>> >> >>
>>>> >> >> >
>>>> >> >> > [compute[root at node2 log]$ rpm -qa | grep -i ovirt
>>>> >> >> > libgovirt-0.3.2-1.el6.x86_64
>>>> >> >> > ovirt-release35-006-1.noarch
>>>> >> >> > ovirt-hosted-engine-ha-1.2.8-1.el6.noarch
>>>> >> >> > ovirt-hosted-engine-setup-1.2.6.1-1.el6.noarch
>>>> >> >> > ovirt-engine-sdk-python-3.5.6.0-1.el6.noarch
>>>> >> >> > ovirt-host-deploy-1.3.2-1.el6.noarch
>>>> >> >> >
>>>> >> >> >
>>>> >> >> > --
>>>> >> >> >
>>>> >> >> > Charles Kozler
>>>> >> >> > Vice President, IT Operations
>>>> >> >> >
>>>> >> >> > FIX Flyer, LLC
>>>> >> >> > 225 Broadway | Suite 1600 | New York, NY 10007
>>>> >> >> > 1-888-349-3593
>>>> >> >> > http://www.fixflyer.com
>>>> >> >> >
>>>> >> >> > NOTICE TO RECIPIENT: THIS E-MAIL IS MEANT ONLY FOR THE INTENDED
>>>> >> >> > RECIPIENT(S)
>>>> >> >> > OF THE TRANSMISSION, AND CONTAINS CONFIDENTIAL INFORMATION
>>>> WHICH IS
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>>>> >> >> > DISTRIBUTION,
>>>> >> >> > OR DISSEMINATION IS STRICTLY PROHIBITED. ALL RIGHTS TO THIS
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>>>> >> >> > IS
>>>> >> >> > RESERVED BY FIX FLYER LLC. IF YOU ARE NOT THE INTENDED
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>>>> >> >> > PLEASE
>>>> >> >> > CONTACT THE SENDER BY REPLY E-MAIL AND PLEASE DELETE THIS
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>>>> >> >> > YOUR
>>>> >> >> > SYSTEM AND DESTROY ANY COPIES.
>>>> >> >> >
>>>> >> >> > _______________________________________________
>>>> >> >> > Users mailing list
>>>> >> >> > Users at ovirt.org
>>>> >> >> > http://lists.ovirt.org/mailman/listinfo/users
>>>> >> >> >
>>>> >> >
>>>> >> >
>>>> >> >
>>>> >> >
>>>> >> > --
>>>> >> >
>>>> >> > Charles Kozler
>>>> >> > Vice President, IT Operations
>>>> >> >
>>>> >> > FIX Flyer, LLC
>>>> >> > 225 Broadway | Suite 1600 | New York, NY 10007
>>>> >> > 1-888-349-3593
>>>> >> > http://www.fixflyer.com
>>>> >> >
>>>> >> > NOTICE TO RECIPIENT: THIS E-MAIL IS MEANT ONLY FOR THE INTENDED
>>>> RECIPIENT(S)
>>>> >> > OF THE TRANSMISSION, AND CONTAINS CONFIDENTIAL INFORMATION WHICH IS
>>>> >> > PROPRIETARY TO FIX FLYER LLC. ANY UNAUTHORIZED USE, COPYING,
>>>> DISTRIBUTION,
>>>> >> > OR DISSEMINATION IS STRICTLY PROHIBITED. ALL RIGHTS TO THIS
>>>> INFORMATION IS
>>>> >> > RESERVED BY FIX FLYER LLC. IF YOU ARE NOT THE INTENDED RECIPIENT,
>>>> PLEASE
>>>> >> > CONTACT THE SENDER BY REPLY E-MAIL AND PLEASE DELETE THIS E-MAIL
>>>> FROM YOUR
>>>> >> > SYSTEM AND DESTROY ANY COPIES.
>>>> >
>>>> >
>>>> >
>>>> >
>>>> > --
>>>> >
>>>> > Charles Kozler
>>>> > Vice President, IT Operations
>>>> >
>>>> > FIX Flyer, LLC
>>>> > 225 Broadway | Suite 1600 | New York, NY 10007
>>>> > 1-888-349-3593
>>>> > http://www.fixflyer.com
>>>> >
>>>> > NOTICE TO RECIPIENT: THIS E-MAIL IS MEANT ONLY FOR THE INTENDED
>>>> RECIPIENT(S) OF THE TRANSMISSION, AND CONTAINS CONFIDENTIAL INFORMATION
>>>> WHICH IS PROPRIETARY TO FIX FLYER LLC. ANY UNAUTHORIZED USE, COPYING,
>>>> DISTRIBUTION, OR DISSEMINATION IS STRICTLY PROHIBITED. ALL RIGHTS TO THIS
>>>> INFORMATION IS RESERVED BY FIX FLYER LLC. IF YOU ARE NOT THE INTENDED
>>>> RECIPIENT, PLEASE CONTACT THE SENDER BY REPLY E-MAIL AND PLEASE DELETE THIS
>>>> E-MAIL FROM YOUR SYSTEM AND DESTROY ANY COPIES.
>>>> >
>>>> > _______________________________________________
>>>> > Users mailing list
>>>> > Users at ovirt.org
>>>> > http://lists.ovirt.org/mailman/listinfo/users
>>>> >
>>>>
>>>
>>>
>>>
>>> --
>>>
>>> *Charles Kozler*
>>> *Vice President, IT Operations*
>>>
>>> FIX Flyer, LLC
>>> 225 Broadway | Suite 1600 | New York, NY 10007
>>> 1-888-349-3593
>>> http://www.fixflyer.com <http://fixflyer.com>
>>>
>>> NOTICE TO RECIPIENT: THIS E-MAIL IS MEANT ONLY FOR THE INTENDED
>>> RECIPIENT(S) OF THE TRANSMISSION, AND CONTAINS CONFIDENTIAL INFORMATION
>>> WHICH IS PROPRIETARY TO FIX FLYER LLC. ANY UNAUTHORIZED USE, COPYING,
>>> DISTRIBUTION, OR DISSEMINATION IS STRICTLY PROHIBITED. ALL RIGHTS TO THIS
>>> INFORMATION IS RESERVED BY FIX FLYER LLC. IF YOU ARE NOT THE INTENDED
>>> RECIPIENT, PLEASE CONTACT THE SENDER BY REPLY E-MAIL AND PLEASE DELETE THIS
>>> E-MAIL FROM YOUR SYSTEM AND DESTROY ANY COPIES.
>>>
>>
>>
>>
>> --
>> Sandro Bonazzola
>> Better technology. Faster innovation. Powered by community collaboration.
>> See how it works at redhat.com
>>
>
--
*Charles Kozler*
*Vice President, IT Operations*
FIX Flyer, LLC
225 Broadway | Suite 1600 | New York, NY 10007
1-888-349-3593
http://www.fixflyer.com <http://fixflyer.com>
NOTICE TO RECIPIENT: THIS E-MAIL IS MEANT ONLY FOR THE INTENDED
RECIPIENT(S) OF THE TRANSMISSION, AND CONTAINS CONFIDENTIAL INFORMATION
WHICH IS PROPRIETARY TO FIX FLYER LLC. ANY UNAUTHORIZED USE, COPYING,
DISTRIBUTION, OR DISSEMINATION IS STRICTLY PROHIBITED. ALL RIGHTS TO THIS
INFORMATION IS RESERVED BY FIX FLYER LLC. IF YOU ARE NOT THE INTENDED
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