Thank you for your help.
After more troubleshooting and host reboots, I accidentally discovered that
the backing disk on ovirt2 (host) had suffered a failure. On reboot, the
raid card refused to see it at all. It said it had cache waiting to be
written to disk, and in the end, as it couldn't (wouldn't) see that disk, I
had no choice but to discard that cache and boot up without the physical
disk. Since doing so (and running a gluster volume remove for the affected
host), things are running like normal.
I don't understand why one bad disk wasn't simply failed, or if one
underlying process was having such a problem, the other hosts didn't take
it offline and continue (much like RAID would have done). Instead,
everything was broke (including gluster volumes on unaffected disks that
are fully functional across all hosts).
I'm seeing the need to go multi-spindle for each storage, and I don't want
to do that with the ovirt hosts due to hardware concerns/issues (I have to
use the PERC6i, which I am also learning to distrust), and I would have to
use 2.5in disks (I want to use 3.5"). As such, I will be going to a
dedicated storage server with 12 spindles in a RAID6 configuration. I'm
debating if its worth setting it up as a gluster replica 1 system (so I can
easily migrate later), or just build it NFS with FreeNAS. I'm leaning to
the latter, as it seems pointless to run gluster on a single node.
--Jim
On Sun, Jul 8, 2018 at 3:54 AM, Yaniv Kaul <ykaul(a)redhat.com> wrote:
On Sat, Jul 7, 2018 at 8:45 AM, Jim Kusznir <jim(a)palousetech.com> wrote:
> So, I'm still at a loss...It sounds like its either insufficient
> ram/swap, or insufficient network. It seems to be neither now. At this
> point, it appears that gluster is just "broke" and killing my systems for
> no descernable reason. Here's detals, all from the same system (currently
> running 3 VMs):
>
> [root@ovirt3 ~]# w
> 22:26:53 up 36 days, 4:34, 1 user, load average: 42.78, 55.98, 53.31
> USER TTY FROM LOGIN@ IDLE JCPU PCPU WHAT
> root pts/0 192.168.8.90 22:26 2.00s 0.12s 0.11s w
>
> bwm-ng reports the highest data usage was about 6MB/s during this test
> (and that was combined; I have two different gig networks. One gluster
> network (primary VM storage) runs on one, the other network handles
> everything else).
>
> [root@ovirt3 ~]# free -m
> total used free shared buff/cache
> available
> Mem: 31996 13236 232 18 18526
> 18195
> Swap: 16383 1475 14908
>
> top - 22:32:56 up 36 days, 4:41, 1 user, load average: 17.99, 39.69,
> 47.66
>
That is indeed a high load average. How many CPUs do you have, btw?
> Tasks: 407 total, 1 running, 405 sleeping, 1 stopped, 0 zombie
> %Cpu(s): 8.6 us, 2.1 sy, 0.0 ni, 87.6 id, 1.6 wa, 0.0 hi, 0.1 si,
> 0.0 st
> KiB Mem : 32764284 total, 228296 free, 13541952 used, 18994036
> buff/cache
> KiB Swap: 16777212 total, 15246200 free, 1531012 used. 18643960 avail
> Mem
>
Can you check what's swapping here? (a tweak to top output will show that)
>
> PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+
> COMMAND
>
> 30036 qemu 20 0 6872324 5.2g 13532 S 144.6 16.5 216:14.55
> /usr/libexec/qemu-kvm -name guest=BillingWin,debug-threads=on -S -object
> secret,id=masterKey0,format=raw,file=/v+
> 28501 qemu 20 0 5034968 3.6g 12880 S 16.2 11.7 73:44.99
> /usr/libexec/qemu-kvm -name guest=FusionPBX,debug-threads=on -S -object
> secret,id=masterKey0,format=raw,file=/va+
> 2694 root 20 0 2169224 12164 3108 S 5.0 0.0 3290:42
> /usr/sbin/glusterfsd -s
ovirt3.nwfiber.com --volfile-id
> data.ovirt3.nwfiber.com.gluster-brick2-data -p /var/run/+
>
This one's certainly taking quite a bit of your CPU usage overall.
> 14293 root 15 -5 944700 13356 4436 S 4.0 0.0 16:32.15
> /usr/sbin/glusterfs --volfile-server=192.168.8.11
> --volfile-server=192.168.8.12 --volfile-server=192.168.8.13 --+
>
I'm not sure what the sorting order is, but doesn't look like Gluster is
taking a lot of memory?
> 25100 vdsm 0 -20 6747440 107868 12836 S 2.3 0.3 21:35.20
> /usr/bin/python2 /usr/share/vdsm/vdsmd
>
> 28971 qemu 20 0 2842592 1.5g 13548 S 1.7 4.7 241:46.49
> /usr/libexec/qemu-kvm -name guest=unifi.palousetech.com,debug-threads=on
> -S -object secret,id=masterKey0,format=+
> 12095 root 20 0 162276 2836 1868 R 1.3 0.0 0:00.25 top
>
>
> 2708 root 20 0 1906040 12404 3080 S 1.0 0.0 1083:33
> /usr/sbin/glusterfsd -s
ovirt3.nwfiber.com --volfile-id
> engine.ovirt3.nwfiber.com.gluster-brick1-engine -p /var/+
> 28623 qemu 20 0 4749536 1.7g 12896 S 0.7 5.5 4:30.64
> /usr/libexec/qemu-kvm -name guest=billing.nwfiber.com,debug-threads=on
> -S -object secret,id=masterKey0,format=ra+
>
The VMs I see here and above together account for most? (5.2+3.6+1.5+1.7 =
12GB) - still plenty of memory left.
> 10 root 20 0 0 0 0 S 0.3 0.0 215:54.72
> [rcu_sched]
>
> 1030 sanlock rt 0 773804 27908 2744 S 0.3 0.1 35:55.61
> /usr/sbin/sanlock daemon
>
> 1890 zabbix 20 0 83904 1696 1612 S 0.3 0.0 24:30.63
> /usr/sbin/zabbix_agentd: collector [idle 1 sec]
>
> 2722 root 20 0 1298004 6148 2580 S 0.3 0.0 38:10.82
> /usr/sbin/glusterfsd -s
ovirt3.nwfiber.com --volfile-id
> iso.ovirt3.nwfiber.com.gluster-brick4-iso -p /var/run/gl+
> 6340 root 20 0 0 0 0 S 0.3 0.0 0:04.30
> [kworker/7:0]
>
> 10652 root 20 0 0 0 0 S 0.3 0.0 0:00.23
> [kworker/u64:2]
>
> 14724 root 20 0 1076344 17400 3200 S 0.3 0.1 10:04.13
> /usr/sbin/glusterfs -s localhost --volfile-id gluster/glustershd -p
> /var/run/gluster/glustershd/glustershd.pid -+
> 22011 root 20 0 0 0 0 S 0.3 0.0 0:05.04
> [kworker/10:1]
>
>
> Not sure why the system load dropped other than I was trying to take a
> picture of it :)
>
> In any case, it appears that at this time, I have plenty of swap, ram,
> and network capacity, and yet things are still running very sluggish; I'm
> still getting e-mails from servers complaining about loss of communication
> with something or another; I still get e-mails from the engine about bad
> engine status, then recovery, etc.
>
1g isn't good enough for Gluster. It doesn't help that you have SSD,
because network is certainly your bottleneck even for regular performance,
not to mention when you are healing. Jumbo frames would give you additional
5% or so - nothing to write home about.
> I've shut down 2/3 of my VMs, too....just trying to keep the critical
> ones operating.
>
> At this point, I don't believe the problem is the memory leak, but it
> seems to be triggered by the memory leak, as in all my problems started
> when I got low ram warnings from one of my 3 nodes and began recovery
> efforts from that.
>
> I do really like the idea / concept behind glusterfs, but I really have
> to figure out why its been so poor performing from day one, and its caused
> 95% of my outages (including several large ones lately). If I can get it
> stable, reliable, and well performing, then I'd love to keep it. If I
> can't, then perhaps NFS is the way to go? I don't like the single point of
> failure aspect of it, but my other NAS boxes I run for clients (central
> storage for windows boxes) have been very solid; If I could get that kind
> of reliability for my ovirt stack, it would be a substantial improvement.
> Currently, it seems about every other month I have a gluster-induced outage.
>
> Sometimes I wonder if its just hyperconverged is the issue, but my
> infrastructure doesn't justify three servers at the same location...I might
> be able to do two, but even that seems like its pushing it.
>
We have many happy users running Gluster and hyperconverged. We need to
understand where's the failure in your setup.
>
> Looks like I can upgrade to 10G for about $900. I can order a dual-Xeon
> supermicro 12-disk server, loaded with 2TB WD Enterprise disks and a pair
> of SSDs for the os, 32GB ram, 2.67Ghz CPUs for about $720 delivered. I've
> got to do something to improve my reliability; I can't keep going the way I
> have been....
>
Agreed. Thanks for continuing looking into this, we'll probably need some
Gluster logs to understand what's going on.
Y.
> --Jim
>
>
> On Fri, Jul 6, 2018 at 9:13 PM, Johan Bernhardsson <johan(a)kafit.se>
> wrote:
>
>> Load like that is mostly io based either the machine is swapping or
>> network is to slow. Check I/o wait in top.
>>
>> And the problem where you get oom killer to kill off gluster. That means
>> that you don't monitor ram usage on the servers? Either it's eating all
>> your ram and swap gets really io intensive and then is killed off. Or you
>> have the wrong swap settings in sysctl.conf (there are tons of broken
>> guides that recommends swappines to 0 but that disables swap on newer
>> kernels. The proper swappines for only swapping when nesseary is 1 or a
>> sufficiently low number like 10 default is 60)
>>
>>
>> Moving to nfs will not improve things. You will get more memory since
>> gluster isn't running and that is good. But you will have a single node
>> that can fail with all your storage and it would still be on 1 gigabit only
>> and your three node cluster would easily saturate that link.
>>
>> On July 7, 2018 04:13:13 Jim Kusznir <jim(a)palousetech.com> wrote:
>>
>>> So far it does not appear to be helping much. I'm still getting VM's
>>> locking up and all kinds of notices from overt engine about non-responsive
>>> hosts. I'm still seeing load averages in the 20-30 range.
>>>
>>> Jim
>>>
>>> On Fri, Jul 6, 2018, 3:13 PM Jim Kusznir <jim(a)palousetech.com> wrote:
>>>
>>>> Thank you for the advice and help
>>>>
>>>> I do plan on going 10Gbps networking; haven't quite jumped off that
>>>> cliff yet, though.
>>>>
>>>> I did put my data-hdd (main VM storage volume) onto a dedicated 1Gbps
>>>> network, and I've watched throughput on that and never seen more
than
>>>> 60GB/s achieved (as reported by bwm-ng). I have a separate 1Gbps
network
>>>> for communication and ovirt migration, but I wanted to break that up
>>>> further (separate out VM traffice from migration/mgmt traffic). My
three
>>>> SSD-backed gluster volumes run the main network too, as I haven't
been able
>>>> to get them to move to the new network (which I was trying to use as all
>>>> gluster). I tried bonding, but that seamed to reduce performance rather
>>>> than improve it.
>>>>
>>>> --Jim
>>>>
>>>> On Fri, Jul 6, 2018 at 2:52 PM, Jamie Lawrence <
>>>> jlawrence(a)squaretrade.com> wrote:
>>>>
>>>>> Hi Jim,
>>>>>
>>>>> I don't have any targeted suggestions, because there isn't
much to
>>>>> latch on to. I can say Gluster replica three (no arbiters) on
dedicated
>>>>> servers serving a couple Ovirt VM clusters here have not had these
sorts of
>>>>> issues.
>>>>>
>>>>> I suspect your long heal times (and the resultant long periods of
>>>>> high load) are at least partly related to 1G networking. That is just
a
>>>>> matter of IO - heals of VMs involve moving a lot of bits. My cluster
uses
>>>>> 10G bonded NICs on the gluster and ovirt boxes for storage traffic
and
>>>>> separate bonded 1G for ovirtmgmt and communication with other
>>>>> machines/people, and we're occasionally hitting the bandwidth
ceiling on
>>>>> the storage network. I'm starting to think about 40/100G,
different ways of
>>>>> splitting up intensive systems, and considering iSCSI for specific
volumes,
>>>>> although I really don't want to go there.
>>>>>
>>>>> I don't run FreeNAS[1], but I do run FreeBSD as storage servers
for
>>>>> their excellent ZFS implementation, mostly for backups. ZFS will make
your
>>>>> `heal` problem go away, but not your bandwidth problems, which become
worse
>>>>> (because of fewer NICS pushing traffic). 10G hardware is not exactly
in the
>>>>> impulse-buy territory, but if you can, I'd recommend doing some
testing
>>>>> using it. I think at least some of your problems are related.
>>>>>
>>>>> If that's not possible, my next stops would be optimizing
everything
>>>>> I could about sharding, healing and optimizing for serving the shard
size
>>>>> to squeeze as much performance out of 1G as I could, but that will
only go
>>>>> so far.
>>>>>
>>>>> -j
>>>>>
>>>>> [1] FreeNAS is just a storage-tuned FreeBSD with a GUI.
>>>>>
>>>>> > On Jul 6, 2018, at 1:19 PM, Jim Kusznir
<jim(a)palousetech.com>
>>>>> wrote:
>>>>> >
>>>>> > hi all:
>>>>> >
>>>>> > Once again my production ovirt cluster is collapsing in on
itself.
>>>>> My servers are intermittently unavailable or degrading, customers
are
>>>>> noticing and calling in. This seems to be yet another gluster
failure that
>>>>> I haven't been able to pin down.
>>>>> >
>>>>> > I posted about this a while ago, but didn't get anywhere
(no
>>>>> replies that I found). The problem started out as a glusterfsd
process
>>>>> consuming large amounts of ram (up to the point where ram and swap
were
>>>>> exhausted and the kernel OOM killer killed off the glusterfsd
process).
>>>>> For reasons not clear to me at this time, that resulted in any VMs
running
>>>>> on that host and that gluster volume to be paused with I/O error
(the
>>>>> glusterfs process is usually unharmed; why it didn't continue I/O
with
>>>>> other servers is confusing to me).
>>>>> >
>>>>> > I have 3 servers and a total of 4 gluster volumes (engine, iso,
>>>>> data, and data-hdd). The first 3 are replica 2+arb; the 4th
(data-hdd) is
>>>>> replica 3. The first 3 are backed by an LVM partition (some thin
>>>>> provisioned) on an SSD; the 4th is on a seagate hybrid disk (hdd +
some
>>>>> internal flash for acceleration). data-hdd is the only thing on the
disk.
>>>>> Servers are Dell R610 with the PERC/6i raid card, with the disks
>>>>> individually passed through to the OS (no raid enabled).
>>>>> >
>>>>> > The above RAM usage issue came from the data-hdd volume.
>>>>> Yesterday, I cought one of the glusterfsd high ram usage before the
>>>>> OOM-Killer had to run. I was able to migrate the VMs off the machine
and
>>>>> for good measure, reboot the entire machine (after taking this
opportunity
>>>>> to run the software updates that ovirt said were pending). Upon
booting
>>>>> back up, the necessary volume healing began. However, this time,
the
>>>>> healing caused all three servers to go to very, very high load
averages (I
>>>>> saw just under 200 on one server; typically they've been 40-70)
with top
>>>>> reporting IO Wait at 7-20%. Network for this volume is a dedicated
gig
>>>>> network. According to bwm-ng, initially the network bandwidth would
hit
>>>>> 50MB/s (yes, bytes), but tailed off to mostly in the kB/s for a
while. All
>>>>> machines' load averages were still 40+ and gluster volume heal
data-hdd
>>>>> info reported 5 items needing healing. Server's were
intermittently
>>>>> experiencing IO issues, even on the 3 gluster volumes that appeared
largely
>>>>> unaffected. Even the OS activities on the hosts itself (logging in,
>>>>> running commands) would often be very delayed. The ovirt engine was
>>>>> seemingly randomly throwing engine down / engine up / engine failed
>>>>> notifications. Responsiveness on ANY VM was horrific most of the
time,
>>>>> with random VMs being inaccessible.
>>>>> >
>>>>> > I let the gluster heal run overnight. By morning, there were
still
>>>>> 5 items needing healing, all three servers were still experiencing
high
>>>>> load, and servers were still largely unstable.
>>>>> >
>>>>> > I've noticed that all of my ovirt outages (and I've had
a lot, way
>>>>> more than is acceptable for a production cluster) have come from
gluster.
>>>>> I still have 3 VMs who's hard disk images have become corrupted
by my last
>>>>> gluster crash that I haven't had time to repair / rebuild yet (I
believe
>>>>> this crash was caused by the OOM issue previously mentioned, but I
didn't
>>>>> know it at the time).
>>>>> >
>>>>> > Is gluster really ready for production yet? It seems so
unstable
>>>>> to me.... I'm looking at replacing gluster with a dedicated NFS
server
>>>>> likely FreeNAS. Any suggestions? What is the "right" way
to do production
>>>>> storage on this (3 node cluster)? Can I get this gluster volume
stable
>>>>> enough to get my VMs to run reliably again until I can deploy
another
>>>>> storage solution?
>>>>> >
>>>>> > --Jim
>>>>> > _______________________________________________
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>>>>>
>>>>>
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>>
>
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