Usually rebuilding the rpm database consists of:rm /var/lib/rpm/__db*- backup of
/var/lib/rpm (just in case)cd /var/lib/rpm/usr/lib/rpm/rpmdb_verify Packages ->
expected to failmv Packages Packages.bad/usr/lib/rpm/rpmdb_dump Packages.bad |
/usr/lib/rpm/rpmdb_load Packages
/usr/lib/rpm/rpmdb_verify Packages -> should succeedrpm -v --rebuilddb
I doubt the procedure has changed on EL8.In worst case scenario, you can copy the db from
identical host.
Best Regards,Strahil Nikolov
On Fri, Jan 14, 2022 at 10:08, Gianluca Cecchi<gianluca.cecchi(a)gmail.com> wrote:
Just wanted to share what in subject and feedback/comments welcome.
Starting env is an external engine on CentOS 8.4, updated up to late September, with 4.4.8
async 2 (ovirt-engine-4.4.8.6-1.el8.noarch.rpm) and kernel 4.18.0-305.19.1.el8_4
[g.cecchi@ovmgr1 ~]$ cat /etc/centos-release
CentOS Linux release 8.4.2105
I migrated to Rocky Linux 8.5 and then run engine-setup to take it to current 4.4.9
level.The system is a VM on a vSphere environment.Currently there are 3 hosts with CentOS
8.4, that I'm going then to migrate to Rocky Linux too.
Downloaded the current migration script from
https://raw.githubusercontent.com/rocky-linux/rocky-tools/main/migrate2ro...
chmod +x migrate2rocky.sh
My engine needs a proxy to exit on the internet and the script doesn't check my
/etc/yum.conf configuration
so I set
export https_proxy=http://my_proxy:my_proxy_port
export http_proxy=http://my_proxy:my_proxy_port (not sure if this necessary...)
otherwise when you run the script you get
curl: (7) Failed to connect to
dl.rockylinux.org port 443: Connection timed out
Error downloading the Rocky Linux signing key.
then as root
./migrate2rocky.sh -r
notable things observed:
. some packages from ovirt repos are gathered too... I don't know if correct in this
stage...
Running dnf update before we attempt the migration.
Last metadata expiration check: 0:00:47 ago on Thu Jan 13 11:56:21 2022.
Dependencies resolved.
========================================================================
. . .
otopi-common noarch 1.9.6-1.el8
ovirt-4.4 94 k
ovirt-ansible-collection noarch 1.6.5-1.el8
ovirt-4.4 289 k
ovirt-engine-dwh-grafana-integration-setup noarch 4.4.9.1-1.el8
ovirt-4.4 88 k
ovirt-engine-dwh-setup noarch 4.4.9.1-1.el8
ovirt-4.4 95 k
ovirt-engine-extension-aaa-ldap noarch 1.4.5-1.el8
ovirt-4.4 130 k
ovirt-engine-metrics noarch 1.4.4-1.el8
ovirt-4.4 92 k
ovirt-engine-setup noarch 4.4.9.5-1.el8
ovirt-4.4 18 k
ovirt-engine-setup-base noarch 4.4.9.5-1.el8
ovirt-4.4 116 k
ovirt-engine-setup-plugin-cinderlib noarch 4.4.9.5-1.el8
ovirt-4.4 39 k
ovirt-engine-setup-plugin-imageio noarch 4.4.9.5-1.el8
ovirt-4.4 27 k
ovirt-engine-setup-plugin-ovirt-engine noarch 4.4.9.5-1.el8
ovirt-4.4 203 k
ovirt-engine-setup-plugin-ovirt-engine-common noarch 4.4.9.5-1.el8
ovirt-4.4 122 k
ovirt-engine-setup-plugin-vmconsole-proxy-helper noarch 4.4.9.5-1.el8
ovirt-4.4 38 k
ovirt-engine-setup-plugin-websocket-proxy noarch 4.4.9.5-1.el8
ovirt-4.4 39 k
ovirt-engine-vmconsole-proxy-helper noarch 4.4.9.5-1.el8
ovirt-4.4 26 k
ovirt-engine-websocket-proxy noarch 4.4.9.5-1.el8
ovirt-4.4 33 k
ovirt-imageio-client x86_64 2.3.0-1.el8
ovirt-4.4 21 k
ovirt-imageio-common x86_64 2.3.0-1.el8
ovirt-4.4 158 k
ovirt-imageio-daemon x86_64 2.3.0-1.el8
ovirt-4.4 15 k
ovirt-release44 noarch 4.4.9.3-1.el8
ovirt-4.4 20 k
ovirt-web-ui noarch 1.7.2-1.el8
ovirt-4.4 11 M
. . .
qemu-img x86_64 15:6.0.0-33.el8
ovirt-4.4-advanced-virtualization 1.9 M
. . .
Transaction Summary
=========================================================================================
Install 5 Packages
Upgrade 393 Packages
Remove 3 Packages
Total download size: 689 M
. . .
Generating grub configuration file ...
File descriptor 3 (/dev/pts/1) leaked on vgs invocation. Parent PID 4056644:
/usr/sbin/grub2-probe
File descriptor 4 (/dev/pts/1) leaked on vgs invocation. Parent PID 4056644:
/usr/sbin/grub2-probe
File descriptor 5 (/var/log/migrate2rocky.log) leaked on vgs invocation. Parent PID
4056644: /usr/sbin/grub2-probe
File descriptor 3 (/dev/pts/1) leaked on vgs invocation. Parent PID 4056644:
/usr/sbin/grub2-probe
. . .
Adding boot menu entry for EFI firmware configuration
done
BootCurrent: 0003
BootOrder: 0004,0003,0000,0001,0002
Boot0000* EFI Virtual disk (0.0)
Boot0001* EFI VMware Virtual SATA CDROM Drive (0.0)
Boot0002* EFI Network
Boot0003* CentOS Linux
Boot0004* Rocky Linux
Done, please reboot your system.
A log of this installation can be found at /var/log/migrate2rocky.log
Due to the oVirt related packages update, I then executed the upgrade, running the
"engine-setup" command, without rebooting the server at this stage
In the output I got these things with many packages to be installed; I don't know if
it is something depending on 4.4.8 -> 4.4.9 or on Rocky migration:
. . .
Checking for product updates...
Setup needs to install or update the following packages:
[install] adobe-mappings-cmap-20171205-3.el8.noarch will be installed
[install] adobe-mappings-cmap-deprecated-20171205-3.el8.noarch will be
installed
[install] adobe-mappings-pdf-20180407-1.el8.noarch will be installed
[install] atk-2.28.1-1.el8.x86_64 will be installed
[install] blosc-1.17.0-1.el8.x86_64 will be installed
[install] ceph-common-16.2.7-1.el8.x86_64 will be installed
[install] dejavu-sans-fonts-2.35-7.el8.noarch will be installed
[install] fribidi-1.0.4-8.el8.x86_64 will be installed
[install] gd-2.2.5-7.el8.x86_64 will be installed
[install] gdk-pixbuf2-modules-2.36.12-5.el8.x86_64 will be installed
[install] google-droid-sans-fonts-20120715-13.el8.noarch will be installed
[install] gperftools-libs-2.9.1-1.el8.x86_64 will be installed
[install] graphviz-2.40.1-43.el8.x86_64 will be installed
[install] gtk-update-icon-cache-3.22.30-8.el8.x86_64 will be installed
[install] gtk2-2.24.32-5.el8.x86_64 will be installed
[install] hdf5-1.10.5-5.el8.x86_64 will be installed
[install] hicolor-icon-theme-0.17-2.el8.noarch will be installed
[install] jasper-libs-2.0.14-5.el8.x86_64 will be installed
[install] jbig2dec-libs-0.16-1.el8.x86_64 will be installed
[install] jbigkit-libs-2.1-14.el8.x86_64 will be installed
[install] leveldb-1.20-1.el8.x86_64 will be installed
[install] libICE-1.0.9-15.el8.x86_64 will be installed
[install] libSM-1.2.3-1.el8.x86_64 will be installed
[install] libXaw-1.0.13-10.el8.x86_64 will be installed
[install] libXcomposite-0.4.4-14.el8.x86_64 will be installed
[install] libXcursor-1.1.15-3.el8.x86_64 will be installed
[install] libXdamage-1.1.4-14.el8.x86_64 will be installed
[install] libXfixes-5.0.3-7.el8.x86_64 will be installed
[install] libXft-2.3.3-1.el8.x86_64 will be installed
[install] libXi-1.7.10-1.el8.x86_64 will be installed
[install] libXinerama-1.1.4-1.el8.x86_64 will be installed
[install] libXmu-1.1.3-1.el8.x86_64 will be installed
[install] libXpm-3.5.12-8.el8.x86_64 will be installed
[install] libXrandr-1.5.2-1.el8.x86_64 will be installed
[install] libXt-1.1.5-12.el8.x86_64 will be installed
[install] libXxf86misc-1.0.4-1.el8.x86_64 will be installed
[install] libXxf86vm-1.1.4-9.el8.x86_64 will be installed
[install] libaec-1.0.2-3.el8.x86_64 will be installed
[install] libbabeltrace-1.5.4-3.el8.x86_64 will be installed
[install] libcephfs2-16.2.7-1.el8.x86_64 will be installed
. . .
[install] urw-base35-nimbus-roman-fonts-20170801-10.el8.noarch will be
installed
[install] urw-base35-nimbus-sans-fonts-20170801-10.el8.noarch will be installed
[install] urw-base35-p052-fonts-20170801-10.el8.noarch will be installed
[install] urw-base35-standard-symbols-ps-fonts-20170801-10.el8.noarch will be
installed
[install] urw-base35-z003-fonts-20170801-10.el8.noarch will be installed
[install] xorg-x11-font-utils-7.5-41.el8.x86_64 will be installed
[install] xorg-x11-fonts-ISO8859-1-100dpi-7.5-19.el8.noarch will be installed
[install] xorg-x11-server-utils-7.7-27.el8.x86_64 will be installed
Replying "No" will abort Setup. You can pass the option
"--offline" to prevent installing or updating packages.
Do you wish to update them now? (Yes, No) [Yes]:
. . . I went ahead pressing Return button
DNF Downloaded Ceph packages for x86_64
[ ERROR ] DNF Importing GPG key 0xE451E5B5:
Userid : "CentOS Storage SIG
(
http://wiki.centos.org/SpecialInterestGroup/S
torage) <security(a)centos.org>"
Fingerprint: 7412 9C0B 173B 071A 3775 951A D4A2 E50B E451 E5B5
From :
https://www.centos.org/keys/RPM-GPG-KEY-CentOS-SIG-Storage
Please confirm Confirm use of GPG Key userid=CentOS Storage SIG (
http://wiki.ce
ntos.org/SpecialInterestGroup/Storage) <security(a)centos.org> hexkeyid=E451E5B5
[yes/no]: yes
[ INFO ] DNF Installed: urw-base35-fonts-common-20170801-10.el8.noarch
. . .
--== END OF SUMMARY ==--
[ INFO ] Stage: Clean up
Log file is located at
/var/log/ovirt-engine/setup/ovirt-engine-setup-20220113133933-7l9rq4.log
[ INFO ] Generating answer file
'/var/lib/ovirt-engine/setup/answers/20220113134624-setup.conf'
[ INFO ] Stage: Pre-termination
[ INFO ] Stage: Termination
[ INFO ] Execution of setup completed successfully
so it ended ok
at this stage, before reboot
# yum update
Last metadata expiration check: 1:38:48 ago on Thu 13 Jan 2022 12:07:45 PM CET.
Dependencies resolved.
Nothing to do.
Complete!
reboot
But after reboot
[root@ovmgr1 g.cecchi]# dnf update
error: rpmdb: BDB0113 Thread/process 2771/140020593752960 failed: BDB1507 Thread died in
Berkeley DB library
error: db5 error(-30973) from dbenv->failchk: BDB0087 DB_RUNRECOVERY: Fatal error, run
database recovery
error: cannot open Packages index using db5 - (-30973)
error: cannot open Packages database in /var/lib/rpm
Error: Error: rpmdb open failed
[root@ovmgr1 g.cecchi]# ls -lrt /var/lib/rpm
total 241400
-rw-r--r--. 1 root root 8192 Jan 13 12:07 Enhancename
-rw-r--r--. 1 root root 8192 Jan 13 12:14 Filetriggername
-rw-r--r--. 1 root root 8192 Jan 13 12:14 Supplementname
-rw-r--r--. 1 root root 8192 Jan 13 13:44 Triggername
-rw-r--r--. 1 root root 8192 Jan 13 13:44 Suggestname
-rw-r--r--. 1 root root 8192 Jan 13 13:44 Recommendname
-rw-r--r--. 1 root root 8192 Jan 13 13:44 Transfiletriggername
-rw-r--r--. 1 root root 32768 Jan 13 13:44 Obsoletename
-rw-r--r--. 1 root root 16384 Jan 13 13:44 Conflictname
-rw-r--r--. 1 root root 232259584 Jan 13 13:44 Packages
-rw-r--r--. 1 root root 69632 Jan 13 13:44 Name
-rw-r--r--. 1 root root 6549504 Jan 13 13:44 Basenames
-rw-r--r--. 1 root root 32768 Jan 13 13:44 Group
-rw-r--r--. 1 root root 466944 Jan 13 13:44 Requirename
-rw-r--r--. 1 root root 3350528 Jan 13 13:44 Providename
-rw-r--r--. 1 root root 2478080 Jan 13 13:44 Dirnames
-rw-r--r--. 1 root root 98304 Jan 13 13:45 Sigmd5
-rw-r--r--. 1 root root 36864 Jan 13 13:45 Installtid
-rw-r--r--. 1 root root 167936 Jan 13 13:45 Sha1header
-rw-r--r--. 1 root root 1318912 Jan 13 13:50 __db.003
-rw-r--r--. 1 root root 90112 Jan 13 13:50 __db.002
-rw-r--r--. 1 root root 286720 Jan 13 13:50 __db.001
[root@ovmgr1 g.cecchi]# date
I followed what discussed here to rebuild the rpm database:
https://cloudlinux.zendesk.com/hc/en-us/articles/115004075294-Fix-rpmdb-T...
[root@ovmgr1 g.cecchi]# mkdir /var/lib/rpm/backup
[root@ovmgr1 g.cecchi]# cp -a /var/lib/rpm/__db* /var/lib/rpm/backup/
[root@ovmgr1 g.cecchi]# rm -f /var/lib/rpm/__db.[0-9][0-9]*
[root@ovmgr1 g.cecchi]# rpm --quiet -qa
[root@ovmgr1 g.cecchi]# rpm --rebuilddb
error: could not delete old database at /var/lib/rpmold.2997
[root@ovmgr1 g.cecchi]# yum clean all
163 files removed
[root@ovmgr1 g.cecchi]#
[root@ovmgr1 g.cecchi]# ls -lrt /var/lib/rpm
total 155112
-rw-r--r--. 1 root root 8192 Jan 13 13:53 Enhancename
-rw-r--r--. 1 root root 8192 Jan 13 13:53 Filetriggername
-rw-r--r--. 1 root root 8192 Jan 13 13:53 Supplementname
-rw-r--r--. 1 root root 8192 Jan 13 13:53 Suggestname
-rw-r--r--. 1 root root 8192 Jan 13 13:53 Transfiletriggername
-rw-r--r--. 1 root root 8192 Jan 13 13:53 Recommendname
-rw-r--r--. 1 root root 8192 Jan 13 13:53 Triggername
-rw-r--r--. 1 root root 73728 Jan 13 13:53 Sigmd5
-rw-r--r--. 1 root root 114688 Jan 13 13:53 Sha1header
-rw-r--r--. 1 root root 356352 Jan 13 13:53 Requirename
-rw-r--r--. 1 root root 3325952 Jan 13 13:53 Providename
-rw-r--r--. 1 root root 146223104 Jan 13 13:53 Packages
-rw-r--r--. 1 root root 32768 Jan 13 13:53 Obsoletename
-rw-r--r--. 1 root root 69632 Jan 13 13:53 Name
-rw-r--r--. 1 root root 20480 Jan 13 13:53 Installtid
-rw-r--r--. 1 root root 28672 Jan 13 13:53 Group
-rw-r--r--. 1 root root 2342912 Jan 13 13:53 Dirnames
-rw-r--r--. 1 root root 16384 Jan 13 13:53 Conflictname
-rw-r--r--. 1 root root 5820416 Jan 13 13:53 Basenames
-rw-r--r--. 1 root root 90112 Jan 13 13:53 __db.002
-rw-r--r--. 1 root root 286720 Jan 13 13:53 __db.001
-rw-r--r--. 1 root root 263800 Jan 13 13:53 __db.003
[root@ovmgr1 g.cecchi]#
[root@ovmgr1 g.cecchi]# dnf update
Ceph packages for x86_64 1.0 MB/s | 412 kB 00:00
Rocky Linux 8 - AppStream 8.9 MB/s | 8.7 MB 00:00
Rocky Linux 8 - BaseOS 4.3 MB/s | 4.6 MB 00:01
Rocky Linux 8 - Extras 6.2 kB/s | 10 kB 00:01
Rocky Linux 8 - PowerTools 3.5 MB/s | 2.5 MB 00:00
Latest oVirt 4.4 Release 388 kB/s | 2.6 MB 00:06
Extra Packages for Enterprise Linux 8 - x86_64 6.9 MB/s | 11 MB 00:01
CentOS-8 - Gluster 8 133 kB/s | 77 kB 00:00
virtio-win builds roughly matching what will be shipped 92 kB/s | 143 kB 00:01
Copr repo for EL8_collection owned by sbonazzo 226 kB/s | 246 kB 00:01
Copr repo for gluster-ansible owned by sac 10 kB/s | 7.3 kB 00:00
Advanced Virtualization packages for x86_64 1.2 MB/s | 255 kB 00:00
CentOS-8 - oVirt 4.4 5.3 MB/s | 2.3 MB 00:00
CentOS-8 - OpsTools - collectd 1.3 MB/s | 149 kB 00:00
CentOS-8 - NFV OpenvSwitch 533 kB/s | 67 kB 00:00
OpenStack Victoria Repository 6.2 MB/s | 3.7 MB 00:00
Dependencies resolved.
Nothing to do.
Complete!
[root@ovmgr1 g.cecchi]#
Is the above repos' list supposed to be ok?
Also, currently I have these 3 files
[root@ovmgr1 g.cecchi]# cat /etc/rocky-release
Rocky Linux release 8.5 (Green Obsidian)
[root@ovmgr1 g.cecchi]# cat /etc/centos-release
Rocky Linux release 8.5 (Green Obsidian)
[root@ovmgr1 g.cecchi]# cat /etc/redhat-release
Rocky Linux release 8.5 (Green Obsidian)
[root@ovmgr1 g.cecchi]#
I don't know if I have to remove any of those....
On manager now, connecting to the web admin UI:
oVirt Open Virtualization Manager
Software Version:4.4.9.5-1.el8
The hosts are there and so the VMs. More tests and checks to be done before updating
hosts.
In /etc/alternatives directory some java links were missing as detailed in Rocky migration
page
https://github.com/rocky-linux/rocky-tools/tree/main/migrate2rocky
followed their instructions
[root@ovmgr1 g.cecchi]# rpm -qa --scripts java-{1.8.0,11}-openjdk-{headless,devel} | sed
-n '/postinstall/, /exit/{ /postinstall/! { /exit/ ! p} }' | sh
[root@ovmgr1 g.cecchi]#
Gianluca
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